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贺金秋,苗敬南,马 超,樊紫薇,王超丽,李欢欢,赵 月,刘文轩.小麦SPL家族基因在非生物胁迫下的表达分析[J].麦类作物学报,2023,(10):1335
小麦SPL家族基因在非生物胁迫下的表达分析
Expression Analysis of SPL Gene Family in Wheat under Abiotic Stresses
  
DOI:
中文关键词:  小麦  SPL家族基因  非生物胁迫  表达模式
英文关键词:Wheat  SPL gene family  Abiotic stress  Expression pattern
基金项目:国家自然科学基金项目(31801363);河南省科技研发计划联合基金项目(222103810004);河南省高等学校重点科研项目(23A210020)
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贺金秋,苗敬南,马 超,樊紫薇,王超丽,李欢欢,赵 月,刘文轩 (河南农业大学生命科学学院河南郑州 450002) 
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中文摘要:
      SQUAMOSA promoter binding protein like(SPL)是一类在植物中广泛存在的转录因子家族,在调控植物生长发育、响应逆境胁迫等方面发挥着重要作用。为解析小麦中SPL家族基因响应非生物胁迫的机理,本研究采用生物信息学的方法在全基因组范围内对小麦SPL基因家族成员进行鉴定,并对鉴定到的SPL基因进行表达模式分析。结果表明,在全基因组范围内共鉴定到56个小麦SPL基因,其中27个是miR156的靶基因;系统进化分析发现,56个小麦SPL基因聚类为7个亚家族。基于转录组数据对表达模式进行分析,发现36个小麦SPL基因与非生物胁迫响应相关,响应缺氮、缺磷、高盐、低温、干旱、高温胁迫以及热旱共胁迫的基因分别有12、16、22、6、13、14和21个,其中TraesCS3D02G425800同时响应7种非生物胁迫。qRT PCR验证结果与转录组数据基本一致。
英文摘要:
      SQUAMOSA promoter binding protein like(SPL) gene family is a family of transcription factors widely existing in plants, and plays important roles in regulating plant growth and development and responses to stresses. In order to further analyze the mechanism of SPL gene family responding to abiotic stresses, bioinformatics methods were used to identify SPL family members in the wheat genome database, and the expression of the identified genes were analyzed under abiotic stress conditions such as nitrogen deficiency, phosphorus deficiency, high salt, low temperature, drought, and high temperature. The results showed that 56 SPL family genes were identified in wheat genome, and 27 of which were target genes of miR156. Phylogenetic analysis showed that 56 wheat SPL genes were clustered into 7 subfamilies. Based on transcriptome data, the expression patterns of 36 wheat SPL genes related to abiotic stress response were analyzed, and 12, 16, 22, 6, 13, 14 and 21 genes were found to respond to nitrogen deficiency, phosphorus deficiency, high salt, low temperature, drought, high temperature, and combination stress of high temperature and drought, respectively. TraesCS3D02G425800 responded to seven abiotic stresses simultaneously. The results of qRT-PCR were consistent with the transcriptome data.
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